Archives for posts with tag: statistics

‘Tree of life’ for 2.3 million species released“A first draft of the ‘tree of life’ for the roughly 2.3 million named species of animals, plants, fungi and microbes — from platypuses to puffballs — has been released. A collaborative effort among eleven institutions, the tree depicts the relationships among living things as they diverged from one another over time, tracing back to the beginning of life on Earth more than 3.5 billion years ago. Tens of thousands of smaller trees have been published over the years for select branches of the tree of life — some containing upwards of 100,000 species — but this is the first time those results have been combined into a single tree that encompasses all of life.”

Taste Mutation Helps Monkeys Enjoy Human Food – nice example of recent and local evolution.

SNP hits on cognitive ability from 300k individuals – from steve hsu.

General Cognitive Ability Is Almost Perfectly Stable from Early Adulthood to Late Middle Age“[I]ndividual differences in general intelligence that exist at age 18 are almost perfectly preserved to age 60, after which this stability starts to slowly break down.” – @ human varieties.

Genome-wide autozygosity is associated with lower general cognitive ability“We found that increased levels of autozygosity predicted lower general cognitive ability, and estimate a drop of 0.6 s.d. among the offspring of first cousins (P=0.003–0.02 depending on the model). This effect came predominantly from long and rare autozygous tracts, which theory predicts as more likely to be deleterious than short and common tracts.” – discuss. (~_^)

Study Reports Rare Genetic Mutations Responsible for Almost Half of Autism Cases“Quantitative study identifies 239 genes whose ‘vulnerability’ to devastating de novo mutation makes them priority research targets.”

Genetic transmission of reading ability – h/t to the siberian fox! who tweeted: “Heritability of reading ability is 62%. Previous estimates lower because of assortive mating (r=.38).”

Clannishness – the Series: Zigzag Lightning in the Brain – from jayman. see also: a few thoughts. from me! (^_^)

Inequality among 32 London Boroughs: An S factor analysis and The general religious factor among Muslims: a multi-level factor analysis – from emil kirkegaard.

It’s official: The Maltese are the fattest in all of the European Union“Despite Malta’s weighty problem, the Maltese have a less than average prevalence of premature mortality from cardiovascular diseases, cancer, diabetes and chronic respiratory disease.” – h/t staffan!

Support for linguistic macrofamilies from weighted sequence alignment“This article reports findings regarding the automatic classification of Eurasian languages using techniques from computational biology (such as sequence alignment, phylogenetic inference, and bootstrapping). Main results are that there is solid support for the hypothetical linguistic macrofamilies Eurasiatic and Austro-Tai.”

Our Mental Noise Grows More Intense As We Age, So Our Brains Lose Processing Speed Over Time

Ancient hominid ears were tuned to high frequencies“A. africanus and P. robustus could have heard high-frequency consonants associated with the letters t, k, f and s better than either chimps or present-day people do, the team found.”

Extreme Altruism – The Case of the Pathological Do-Gooder – from helian.

Personal values and intergroup outcomes of concern for group honor – h/t andrew sabisky! who tweeted: “group honour culture = more empathy, lower openness, more endorsement of violence towards Americans.”

Scope Insensitivity in Helping Decisions: Is It a Matter of Culture and Values? – h/t robin hanson! who tweeted: “Contrast to westerners, collectivist Bedouin NOT more willing to help one concrete victim than a group of victims.”

Indigenous Belief in a Just World: New Zealand Māori and other Ethnicities Compared“Māori have more ‘leftist’ beliefs than non-Māori (i.e., nearly 60% of Māori blame an unfair society compared to 41% of non-Māori).”

Tiny mitochondria play outsized role in human evolution and disease

An architecture for encoding sentence meaning in left mid-superior temporal cortex – h/t steve pinker! who tweeted: “The most important paper in cognitive neuroscience in many years: How does the brain represent who did what to whom?”

Sex differences and stress across the lifespan – h/t kevin mitchell!

Does the Welfare State Destroy the Family? Evidence from OECD Member Countries“[A]n expansion in the welfare state increases the fertility, marriage, and divorce rates with a quantitatively stronger effect on the marriage rate. We conclude that the welfare state supports family formation in the aggregate. Further, we find that the welfare state decouples marriage and fertility, and therefore, alters the organization of the average family.”

What is a standard deviation? A definition. – from pumpkin person.

Data analysis yields striking maps of human expansion in North American Holocene“[A] group of paleoclimatologists and anthropologists analyzed data recorded in the Canadian Archaeological Radiocarbon Database (CARD), which aggregates 35,905 radiocarbon samples from archaeological sites across the North American continent, and was created by Dr. Richard Morlan of the Canadian Museum of History. By applying a kernel density estimation method to the data, the researchers produced the first maps of temporally distinct paleo-demographic trends that correspond well to existing evidence of human expansion across North America in the Holocene.”

Scientists Discover 9,000-Year-Old Case of Decapitation in the Americas

Remains of 6,000-year-old first settlers [in ireland] found

Archaeological breakthrough could solve the mystery of Greenland’s Vikings

Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir

bonus: Growing a penis at 12: the ‘Guevedoce’ boys of the Dominican Republic – (O.O) – h/t @don_arete!

and the tweet of the week! (~_^) :

(note: comments do not require an email. 5-alpha-reductase deficiency.)

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i dunno about you, but i barely do. (*^_^*)

if you’re like me, and you want to understand statistics better, have a look at emil kirkegaard’s understanding statistics page!

it’s a work in progress, but what he’s got there so far is really cool!

email says he’s got one planned for regression to the mean. any suggestions for other concepts?
_____

(p.s. – i am slowly working on my response to kevin macdonald. will try to get that up over the weekend, fingers crossed. buiyt nort whoile i’n tyyypoing. (~_^) )

(note: comments do not require an email. correlation≠causation)

The Earliest Group Of Modern Humans To Branch Off Survived Until Just 2,300 Years Ago – h/t mr. robert ford!

Archaeologists unearth remains of oldest Norman ever found which ‘fills gap in our knowledge of pre-Neanderthal evolution’“On a bend of the river Seine near Rouen in Normandy, archaeologists have found the remains of the oldest Norman ever discovered. The three bones from the left arm of a pre-Neanderthal should shed fresh light on a little-known period. In particular, they could help scientists to understand the evolution of the squat, muscular hunters who died out 30,000 to 40,000 years ago, just after the first humans arrived in what is now Europe. The discovery of the bones at Tourville-la-Rivière, 14km south of Rouen, is exceptional because ‘this is a period with very few fossils’, according to Bruno Maureille, a palaeontologist at the National Centre for Scientific Research. He said the arm bones, dating from 200,000 years ago, in the Middle Pleistocene era, were ‘the only known example from northern Europe’.”

The first South Americans: Extreme living“After humans arrived in South America, they quickly spread into some of its most remote corners.”

How ancient DNA is rewriting human history“‘Human history is not one of stasis….’ The genetic record shows that for the past tens of thousands of years, mixed human ancestry is the rule and not the exception.” h/t hbd bibliography!

Treasure trove of ancient genomes helps recalibrate the human evolutionary clock

EmTech: Illumina Says 228,000 Human Genomes Will Be Sequenced This Year

Europe the birthplace of art? Cave art shows Indonesia has a claim“Using this method, the researchers determined that one of the hand stencils they sampled was made at least 39,900 years ago and that a painting of an animal known as a pig deer was at least 35,400 years old. In Europe, the oldest known cave painting was of a red disk found in a cave in El Castillo, Spain, that has a minimum age of 40,800 years. The earliest figurative painting, of a rhinoceros, was found in the Chauvet Cave in France; it goes back 38,827 years.”

Ancient Plague’s DNA Revived From A 1,500-Year-Old Tooth – justinian plague. – h/t debbie kennett!

New Genetic ‘Operating System’ Facilitated Evolution of ‘Bilateral’ Animals

Draft of paper about Amish“[T]he difference in mean AQ [‘amishness’] between young Amish men and their non-Amish neighbors is about 2.8 standard deviations. In the IQ world this would correspond to a group different of 42 points. In the stature world this would correspond to a height difference of about 8 inches.” – from henry harpending. see also Amish v. English from steve sailer.

Does evolutionary theory need a rethink? – no. – see also Evolution Ever Evolves from razib.

Widespread signals of convergent adaptation to high altitude in Asia and America

Evolutionary behavioral genetics“We describe the scientific enterprise at the intersection of evolutionary psychology and behavioral genetics — a field that could be termed Evolutionary Behavioral Genetics — and how modern genetic data is revolutionizing our ability to test questions in this field.”

coolest story! a MUST READ!: Finding Clues in Genes of ‘Exceptional Responders’“One study at Memorial Sloan-Kettering Cancer Center tested a drug called everolimus that is approved for kidney and breast cancer. Researchers asked if it could treat bladder cancer. Forty-five patients received the drug. Two responded. ‘The verdict was, “O.K., I guess everolimus does not work in bladder cancer,” ‘ said Dr. David Solit, the principal investigator. But then there were those two patients — one, in particular. Her cancer had spread to her abdomen. She was expected to live less than a year, and there was no treatment for her. But with everolimus, her tumors disappeared. ‘I was at a clinical meeting, and everyone was saying this drug did not work,’ Dr. Solit said. ‘I said, “It worked for her.” ‘ The investigators found out why. Her cancer had a mutation in a gene that made it dependent on a protein, mTOR, for growth. Everolimus squelches the activity of mTOR. The woman is still taking everolimus, and her cancer has not recurred.”

Are adoption gains on the g factor? A meta-analysis“g loadings and adoption gains yield a correlation of −1.” – from te nijenhuis, jongeneel-grimen, and armstrong. – h/t erwin schmidt!

The high heritability of educational achievement reflects many genetically influenced traits, not just intelligence“Genetic research has shown that intelligence makes a major contribution to the heritability of educational achievement. However, we show that other broad domains of behavior such as personality and psychopathology also account for genetic influence on GCSE scores beyond that predicted by intelligence. Together with intelligence, these domains account for 75% of the heritability of GCSE scores. These results underline the importance of genetics in educational achievement and its correlates.” – (because there’s more to hbd than just iq!)

Psychology in the 21st Century“Highly recommended: slides from a recent talk [‘The Genetic Architectures of Psychological Traits’] by James Lee.”

Replicability and Robustness of Genome-Wide-Association Studies for Behavioral Traits“Our results show that large and therefore well-powered genome-wide-association studies can identify replicable genetic associations with behavioral traits.”

Intelligence Is Critical to the Future of Humankind“A conversation with Douglas Detterman, editor of the journal Intelligence” – h/t holtz!

Crime, income, educational attainment and employment among immigrant groups in Norway and Finland – new paper from emil kirkegaard.

Is there no population genetic ‘support’ for a racial hereditarian hypothesis? – h/t jayman! who tweeted: “Racial admixture studies across the Americas all find relationship between ancestry & educational attain. as expected.”

Heavier babies do better in school“A study of children in Florida found that those who were heavier at birth scored higher on math and reading tests in the third to eighth grades.”

Practice Does Not Make Perfect“We are not all created equal where our genes and abilities are concerned.”

another MUST READ, this one from steve sailer: The Bell Curve 20 years later: A New Caste Society. – see also: ‘The Bell Curve’ Turns 20 from robert verbruggen.

Race, Income, and Test Scores – also from robert verbruggen.

The role of lactase persistence in precolonial development“It is shown through a number of specifications that country-level variation in the frequency of lactase persistence is positively and significantly related to population density in 1,500 CE; specifically, a one standard deviation increase in the frequency of lactase persistent individuals (roughly 24 percentage points) is associated with roughly a 40 % increase in precolonial population density.”

Common variants and the biological and genomic architecture of human height“The latest from the GIANT collaboration. They are also estimating ~ 10k causal variants in total, with 697 now identified at genome-wide significance…. With ~1k variants to work with, we can expect progress on the question of whether the ~1 SD group difference in height between north and south europeans is due to selection. Uniformly higher SNP frequencies in the north for variants that slightly increase height would be strong evidence of selection.” – original research paper: Defining the role of common variation in the genomic and biological architecture of adult human height

Big Chickens“More evidence that common genetic variants can produce many standard deviations of change in average phenotype.”

The Giant Mutations in the Human Genome“It turns out that there is a class of giant DNA mutations that share features of developmental disorders: They are surprisingly common, frustratingly diverse, and hard to categorize. Researchers are now discovering that these mutations play a big role in developmental delay disorders. The baffling symptoms are a consequence of the underlying genetic turmoil…. These large mutations are called ‘copy number variants’ or CNVs, and they add or subtract copies of genes.”

Genetic and nonshared environmental factors predict handgun ownership in early adulthood“Analyses revealed a stronger concordance for gun ownership among identical twins as compared to fraternal twins and univariate ACE model results indicated genetic (57%) and nonshared environmental (43%) factors explained the variance in handgun ownership.” – h/t amir sarislan!

Different tastes for different individuals – h/t jayman! who tweeted: “Genetic evidence of recent evolutionary differentiation in taste response across the world.”

From Kale To Pale Ale, A Love Of Bitter May Be In Your Genes

Here’s why you’re bouncing off the walls: the genetics of coffee consumption“Coffee consumption has now been linked to eight genetic variants.”

Do Political Attitudes and Religiosity Share a Genetic Path? – h/t avi tuschman!

Unpacking “evil”: Claiming the core of the Dark Triad

The slow and fast life histories of early birds and night owls: Their future- or present-orientation accounts for their sexually monogamous or promiscuous tendencies – uh oh. i’m a night owl!

Later school start time ‘may boost GCSE results’“Thousands of teenagers are to get an extra hour in bed in a trial to see whether later school start times can boost GCSE results. University of Oxford researchers say teenagers start functioning properly two hours later than older adults…. Prof Russell Foster, director of sleep and circadian neuroscience at Oxford University, said that getting a teenager to start their day at 07:00 is like an adult starting theirs at 05:00.”

How Iceland’s Genealogy Obsession Leads to Scientific Breakthroughs

Infidelity and kin selection: Does cheating seem as bad when it’s “all in the family”?“[C]ontrary to predictions generated by kin selection theory, participants tended to report that they would feel worse if their partners had sex with their relatives. We propose several explanations for the current findings and discuss their implications for kin selection theory.” – h/t neuroskeptic!

Anthropologists find that even among egalitarian forager-farmers, social status can impact health and happiness

Africa is on time“Using survey data on African income distributions and national accounts GDP, we estimate income distributions, poverty rates, and inequality indices for African countries for the period 1990–2011. We show that: (1) African poverty is falling rapidly…. All classes of countries, including those with disadvantageous geography and history, experience reductions in poverty. In particular, poverty fell for both landlocked as well as coastal countries; for mineral-rich as well as mineral-poor countries; for countries with favorable or with unfavorable agriculture; for countries regardless of colonial origin; and for countries with below- or above-median slave exports per capita during the African slave trade.” – h/t mugwump!

Ethnic Divisions and Production in Firms“A body of literature suggests that ethnic heterogeneity limits economic growth. This paper provides microeconometric evidence on the direct effect of ethnic divisions on productivity. In team production at a plant in Kenya, an upstream worker supplies and distributes flowers to two downstream workers who assemble them into bunches. The plant uses an essentially random rotation process to assign workers to positions, leading to three types of teams: (a) ethnically homogeneous teams, and teams in which (b) one or (c) both downstream workers belong to a tribe in rivalry with the upstream worker’s tribe. I find strong evidence that upstream workers undersupply non-coethnic downstream workers (vertical discrimination) and shift flowers from non-coethnic to coethnic downstream workers (horizontal discrimination), at the cost of lower own pay and total output.” – spite! it’s so funny. – h/t ben southwood!

Statistics in educational research – on statistical significance and p-values from andrew sabisky.

Social Network Analysis Shows Direct Evidence for Social Transmission of Tool Use in Wild Chimpanzees – h/t razib!

Reparations for Slavery? – from those who can see.

Researchers Have Identified The Origin Of The HIV/AIDS Pandemic

The Human Genome Is In Stalemate in the War Against Itself

Winter is coming: do you really need a flu jab? – from tom chivers who tweeted: “On the flu jab, and the evidence, and lack of evidence, thereof.”

(Re)Becoming Human“As the sun set over Lake Eyasi in Tanzania, nearly thirty minutes had passed since I had inserted a turkey baster into my bum and injected the feces of a Hadza man – a member of one of the last remaining hunter-gatherers tribes in the world – into the nether regions of my distal colon. I struggled to keep my legs in the air with my toes pointing towards what I thought was the faint outline of the Southern Cross rising in the evening sky. With my hands under my hips – and butt perched against a large rock for support – I peddled an imaginary upside down bicycle in the air to pass the time as I struggled to make sure my new gut ecosystem stayed put inside me. With my butt cheeks flexed and my, you know what puckered, I wondered if I had just made a terrible mistake….”

Strange Seeds on Distant Shores – a look at albion’s seed and american nations, etc., etc. – h/t jayman!

Remains of Alexander the Great’s Father Confirmed Found

Diversity: A Nature & Scientific American special issue – *facepalm*

Philosophy is a Bunch of Empty Ideas: Interview with Peter Unger – (^_^)

bonus: New particle is both matter and antimatter – phreaky physics!

bonus bonus: Physicist turns smartphones into pocket cosmic ray detectors – really cool physics!

bonus bonus bonus: A Kindle loaded with e-books is heavier than an empty one – so there!

bonus bonus bonus bonus: The Questioning of John Rykener, A Male Cross-Dressing Prostitute, 1395 (in london) – shocking!

bonus bonus bonus bonus bonus: Around the world in 400,000 years: Journey of the red fox“[T]his new research shows that the red foxes of North America and Eurasia have been almost entirely reproductively isolated from one another for roughly 400,000 years. During this time, the North American red fox evolved into a new species distinct from its Old World ancestors…. The new genetic research further suggests that the first red foxes originated in the Middle East before beginning their journey of colonization across Eurasia to Siberia, across the Bering Strait and into North America, where they eventually founded the North American population.”

bonus bonus bonus bonus bonus bonus: Cosmic Karma: Mosquitoes Have Flying, Blood-Sucking Parasite of Their Own

bonus bonus bonus bonus bonus bonus bonus: Kangaroos have three vaginas!

(note: comments do not require an email. and just to make your head asplode…. (^_^) )