linkfest – 11/10/15

Selection against Neandertal deleterious alleles“‘Approximately 2-4% of the human genome is in non-Africans comprised of DNA intro- gressed from Neanderthals. Recent studies have shown that there is a paucity of introgressed DNA around functional regions, presumably caused by selection after introgression. [U]sing previously published estimates of inbreeding in Neanderthals, and of the distribution of fitness effects from human protein coding genes, we show that the average Neanderthal would have had at least 40% lower fitness than the average human due to higher levels of inbreeding and an increased mutational load, regardless of the dominance coefficients of new mutations. Using simulations, we show that under the assumption of additive dominance effects, early Neanderthal/human hybrids would have experienced strong negative selection, though not so strong that it would prevent Neanderthal DNA from entering the human population.'” – @dienekes’…

…but see greg cochran: Degenerate Neanderthals“Part of the problem is that the model is probably too simple. There is an argument, which makes sense to me, that suggest that small-N populations do better than you would think, because as the average population fitness gets farther from the optimum, strongly beneficial compensatory mutations become more and more possible.”

A Few Months of Evolutionary Change Reshapes a Whole Community“The overall lesson is that evolutionary change is constant, and that evolving populations can change the very environments to which they’re adapting. Natural selection isn’t shaping species to achieve some single ideal version of themselves, but in pursuit of constantly moving targets — and that’s worth keeping in mind no matter we’re talking about Daphnia magna or Homo sapiens.”

Size (Population) Matters for Inbreeding“Presumably, in large populations there will be many low frequency variants of weak deleterious effect and recessive expression. In contrast, in small populations the power of drift is such that even rather deleterious alleles can be fixed against the gradient of selection. At cross-purposes with this is the idea that because inbreeding populations tend to ‘expose’ alleles which express recessively to selection they can ‘purge’ the genetic load which drags on fitness…. What [the researchers] found is that in line with theoretical prediction those sampled from large populations had lots of segregating deleterious alleles, which manifested in strong inbreeding effect when individuals were purposely crossed with those genetically similar. In contrast, those from small populations did not exhibit so much inbreeding effect, indicating that a lot of the deleterious alleles were already fixed and so exposed. These individuals from small populations also exhibited lower fitness than those from large populations, reflecting in all likelihood their genetic load. Crossing individuals from different small populations resulted in immediately hybrid vigor, as the fixed variants differed across lineages.” – from razib.

Fires in the Forest: The Revolution in Human Evolution“On top of the story of migrations of whole peoples, and the extinction and absorption of others, is the story of bands of men operating as units, related either in truth or fictively, which extract rents across a thickly populated landscape of human cattle.” – also from razib.

Regression to the Mean“Clever people might notice that all of HBD is based on just two concepts: behavioral genetics (or again, more broadly, heritability) and the breeder’s equation. Know those two things and most of the rest follows.” – from jayman.

Deutschland über alles, dann unter allen? – dr. james thompson on an apparent reversal of the flynn effect in germany. (see also his comment here.) – see also Dysgenic Deutschland from anatoly karlin.

The Correlation Between g Loadings and Heritability in Russia“Data from 402 twins aged 13 and 296 twins aged 16 showed correlations of r=−0.45 and r=−0.60, respectively. It is concluded that the two data points are clearly not in line with established findings. It may be that the link between g loadings and heritabilities is more complex than previously thought.” – h/t sketchy person!

Are CEOs Born Leaders? Lessons from Traits of a Million Individuals“CEOs have higher cognitive and non-cognitive ability scores and are taller than typical members of the population. The difference in traits is larger when CEOs run bigger companies; it is smaller when they run family firms, in particular in the capacity of an heir or in a less competitive industry.” – h/t ben southwood! who tweeted: “CEOs: in the top 5% of smarts, height and well-adjusted personality at age 18”

The path and performance of a company leader: A historical examination of the education and cognitive ability of Fortune 500 CEOs“Across the last two decades ≈ 40% of CEOs were on the top 1% of cognitive ability. Even within CEOs, education/ability was associated with company gross revenue.”

The Quantitative Genetics of Disgust Sensitivity“Twin modeling revealed that approximately half of the variation in pathogen, sexual, and moral disgust is due to genetic effects. An independent pathways twin model also revealed that sexual and pathogen disgust sensitivity were influenced by unique sources of genetic variation, while also being significantly affected by a general genetic factor underlying all 3 disgust domains. Moral disgust sensitivity, in contrast, did not exhibit domain-specific genetic variation.” – h/t erwin schmidt!

Can intelligence explain the overrepresentation of liberals and leftists in American academia?“Liberals and leftists are overrepresented in American academia. One explanation is that liberals and leftists have higher intelligence. This hypothesis is tested. Intelligence accounts for some but not all of the overrepresentation.”

Inter-group conflict and cooperation: field experiments before, during and after sectarian riots in Northern Ireland“The idea that cooperative groups out-compete less cooperative groups has been proposed as a theoretical possibility for the evolution of cooperation through cultural group selection…. In this study we test the hypothesis that inter-group conflict promotes parochial altruism (i.e. in-group altruism and out-group hostility) by using longitudinal data of a real-world measure of cooperation – charity and school donations – sampled before, during and after violent sectarian riots between Catholics and Protestants in Belfast, Northern Ireland. We find that conflict is associated with reductions in all types of cooperation, with reduced donations to a neutral charity, and both in-group and out-group primary schools. After the conflict, both in-group and out-group donations increased again. In this context we find no evidence that inter-group conflict promotes parochial altruism.”

Interactions between personality and institutions in cooperative behaviour in humans“We investigate interactions between personality and a punishment situation via two versions of a public goods game. We find that, even in a strong situation, personality matters and, moreover, it is related to strategic shifts in cooperation. Extraversion is associated with a shift from free-riding to cooperation in the presence of punishment, agreeableness is associated with initially higher contributions regardless of game, and, contrary to our predictions, neuroticism is associated with lower contributions regardless of game. Results should lead to new hypotheses that relate variation in biological functioning to individual differences in cooperative behaviour and that consider three-way interactions among personality, institutional context and sociocultural background.” – h/t andrew sabisky!

Nonreligious children are more generous“Religious doctrines typically urge the faithful to treat others with compassion and to put the greater good before selfish interests. But when it comes to generosity, nonreligious kids seem to be more giving, according to a new study of 1170 children from around the world. Children from religious homes — particularly Muslims — also showed a greater inclination to judge someone’s misdeeds as wrong and punish the perpetrators…. Muslim children on average gave the highest rankings and sought harsher punishments than either their Christian or secular counterparts. Decety says he is unsure why this is the case.” – h/t jayman! see also staffan who tweeted: “Religious or not often coincide with Clannish and WEIRDO. A big and likely confound overlooked.” and me: “would’ve been nice if they’d broken down the race/ethnicities for the u.s., canadian, and south african samples.”

Sex and STEM Occupation Predict Autism-Spectrum Quotient (AQ) Scores in Half a Million People“As predicted, sex and occupation differences were observed: on average, males (m = 21.55, SD = 8.82) scored higher than females (m = 18.95; SD = 8.52), and individuals working in a STEM career (m = 21.92, SD = 8.92) scored higher than individuals non-STEM careers (m = 18.92, SD = 8.48). Also as predicted, age and geographic region were not meaningfully correlated with AQ. These results support previous findings relating to sex and STEM careers in the largest set of individuals for which AQ scores have been reported and suggest the AQ is a useful self-report measure of autistic traits.”

Seven Dimensions Of Personality Pathology Are Under Sexual Selection In Modern Spain“In a sample of 959 outpatients, we examine whether, and how, sexual selection acts on seven main dimensions of personality pathology, taking into account mating success, reproductive success, and the mediating role of status. We find that, to varying extents, all personality dimensions are under sexual selection. Far from being predominantly purifying, selective forces push traits in diverging, often pathological, directions. These pressures differ moderately between the sexes. Sexual selection largely acts in males through the acquisition of wealth, and through the duration (rather than the number) of mates. This gives a reproductive advantage to males high in Persistence-Compulsivity. Conversely, because of the decoupling between the number of mates and offspring, the promiscuous strategy of psychopaths is not so successful. Negative Emotionality, the most clinically detrimental trait, is slightly deleterious in males but is positively selected in females, which can help to preserve variation…. An evolutionary perspective on PDs can provide a better understanding of their nature and causes than we have achieved to date by considering them as illnesses.” – h/t siberian fox!

On the relationship between school suspensions, race, single-motherhood, and more and Small update to prior post on school suspension rates, comparing racial/ethnic differences with national aggregates – from mr. random c. analysis, esq.

Polygyny makes men bigger, tougher … and meaner and The contradictions of polygyny – from peter frost.

No evidence that polygynous marriage is a harmful cultural practice in northern Tanzania“We present counterevidence that polygyny is often positively associated with food security and child health within communities and that, although polygyny and health are negatively associated at the group level, such differences are accounted for by alternative socioecological factors. These results support models of polygyny based on female choice and suggest that, in some contexts, prohibiting polygyny could be costly for women and children by restricting marital options.” – h/t sergey gavrilets!

The missing hour of sleep“In reality, there is no single human nature. Genetic evolution didn’t slow down when humans began to split up and settle the different continents. It accelerated. And not just because our ancestors were adapting to different natural environments. Most of the acceleration took place long after the globe had been settled from the equator to the arctic. It happened when humans began to adapt to an increasingly diverse range of cultural environments. And those adaptations were mostly behavioral and psychological. One of them is the way we sleep. The African sleep pattern is normal in its native environment. It is simply an adaptation to a particular set of circumstances, just as the northern European sleep pattern is an adaptation to another set of circumstances.” – also from peter frost.

The Measured Proficiency of Somali Americans – from chuck @humanvarieties. see also: Chisala and Powerpoint Publishing from dr. james thompson.

Heritability of Racial and Ethnic Pride, Preference, and Prejudice“[I]t does seem that individual differences in expressed ethnic and racial preference have a non-trivial genetic basis, as we might have anticipated given that most social preferences do.” – also from chuck.

Genetic and socioeconomic study of mate choice in Latinos reveals novel assortment patterns“In Mexican and Puerto Rican couples, we find that partners share more similar genomic ancestries, which is characterized as the fractions of genome that come from European, Native American, and African ancestries, than random pairs of individuals from the same community. Our analysis shows that this similarity cannot be explained by the individuals’ socioeconomic factors alone.” – h/t ben southwood and jayman!

Cognitive ability and tattoos and piercings – from emil kirkegaard. (full disclosure: i don’t have any tattoos, nor do i have any “extreme” piercings. (~_^) )

G. E. Moore Contra Edvard Westermarck and The Moral Philosophy of G. E. Moore, or Why You Don’t Need to Bother with Aristotle, Hegel, and Kant – from helian.

Corruption In Eastern Europe: Tail Or Dog? – from malcolm pollack.

Huxley: Brave New World Revisited – from steve hsu. also Houellebecq on Tocqueville, Democracy, and Nietzsche.

Crashing the Gates: A Crash Course – from m.g. @thosewhocansee on the european migrant crisis.

Changes in Inequality and Generalized Trust in Europe“This paper analyses the determinants of trust in a pool of 34 European countries over the period 2002–2012. We find that income inequality is negatively related with generalized trust when we analyze the pooled data of individuals with multilevel models, confirming a well-established result in the analysis of cross-country differences in trust…. In contrast, in the fixed effects models, we find negative and significant effects of ethnic and linguistic fractionalization, discrimination (general or based on migrant status) and crime rates on trust.” – behind a paywall.

Why Did Asian America Abandon the GOP? – short answer: the shifting composition of asian americans. – from t.greer.

Het ‘verboden onderwerp’: Inteelt is weldegelijk moslimprobleem – from joost niemöller. in dutch [obv]. h/t sam schulman! who tweeted: “Warning to geneticists: stay out of the #Netherlands. They’re arresting those who mention cousin marriage.”

bonus: Did Africa’s Apes Come From Europe?“Fossil evidence hints that the common ancestor of gorillas, chimpanzees and humans evolved in Europe.” – h/t billare!

bonus bonus: The greatest vanishing act in prehistoric America“Seven centuries ago, tens of thousands of people fled their homes in the American Southwest. Archaeologists are trying to work out why.”

bonus bonus bonus: Thanet, Tanit and the Phoenicians: Place-Names, Archaeology and Pre-Roman Trading Settlements in Eastern Kent?

bonus bonus bonus bonus: Thank heavens, someone figured out which bacteria live on a donkey’s penis – (O.O)

bonus bonus bonus bonus bonus: Ancient mummified hand hidden in wall of Yorkshire cottage ‘has power to entrance humans’ – a hand of glory?!

and the tweet of the week! (i almost forgot)…

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my in-depth analysis of the u.k. elections

heh. no, not really, but…right…here’s what i’ve got. u.k. electoral map on the left taken from here, via anatoly — genetic ancestry map on the right which appeared in this previous post. [click on image for LARGER view.]:

uk-electoral-map-2015-bbc

any patterns that match?

well, obviously, there’s the english vs. scottish divide — the two groups are genetically distinct-ish, and now they’re electorally very distinct. up in scotland, it’s funny that the orkney islanders didn’t follow the lead of most of the rest of scotland — they stuck to the lib dems rather than go with the scottish national party — and they are genetically their own little unique viking group. and they’ve been sticking to liberals or liberal democrats since 1950, thank you very much.

there’s also the english vs. welsh divide — the farther west you go in wales, where the population is more genetically welsh, the less they went for conservatives (like the english in england did). until you get to pembrokeshire, that is, where the population of “little england beyond wales” — which is genetically distinct-ish from the rest of the population in wales (see the upside-down yellow triangles labeled “s. pembrokeshire”) — voted conservative like the rest of the english.

northern ireland? northern ireland is its own story, which i hope you can figure out on your own.

ignoring london (’cause all sorts of people/s have moved to london, from all over the u.k. and the world), i find it very tempting to match the pattern of the labour regions — up in the northeast and northwest and in yorkshire and even southern wales — with the northumbrians, cumbrians, w yorkshire, and s pembrokeshire/welsh border populations on the genetic ancestry map. to be honest, though, the labour regions really match up much better with the former coal-mining/industrial regions of britain (as well as with several large contemporary urban areas, obviously — manchester, liverpool, newcastle, etc.):

uk-electoral-map-2015-bbc-coalfields

this coal-mining-labour pattern is even more pronounced if you look at the election results from 2010 and see the regions of scotland which voted in labour mps back then. the only outlier, really, is anglesey. dunno why they like labour so much. mind you, even though they won in anglesey, labour did get only 31% of the vote there this time ’round. plaid cymru (the welsh nationalist party) got 30%.

so, regional labour party voters = the descendants of miners/industrial workers? the ones that didn’t leave for greener pastures? maybe. and/or this pattern reflects the highland-lowland/tees-exe line divide in britain, and what we’re seeing is a divide between the more manorialized english of the lowlands versus the not-very-manorialized subpopulations of the highlands — and the fact that there was coal in the highland regions is just a coincidence. dunno!

from the bbc, the share of the vote won by the conservatives in each constituency:

uk-electoral-map-2015-conservatives 02

rural areas voted for the conservative party more than urban areas in england. in fact, the spread is fairly even right across the country, just like the even spread of the ethnic english on the genetic ancestry map above. this isn’t the case in either wales or scotland — or northern ireland for that matter. there’s more support for the conservatives in the welsh border regions, where greater numbers of english (including normans, of course) settled. in scotland, there’s greater support for the conservatives in the lowlands rather than in the highlands.

labour:

uk-electoral-map-2015-labour 02

again, most support in those former mining/industrial urbanized regions. plus london. (also: this. (~_^) )

ukip:

uk-electoral-map-2015-ukip 02

a fair amount of support quite evenly spread across england, wales, and even northern ireland. what’d they get? thirteen percent of the vote? less overall support in scotland. and not so much in london, of course. they only got one seat in parliament, though — an mp from clacton — ukip got 44% of the vote there. i dunno anything about clacton-on-sea, so you tell me why there. the party got 30% of the vote in rotherham, which makes plenty of sense. there’s a hotspot of ukip support up there judging by the map. there’s another hotspot to the east there — 34% of the vote went to ukip in the boston & skegness constituency. lot of eastern european immigrants in that area of the country. lot of locales along the thames estuary also with rather high support for ukip. just outside london (where there’s a lot of immigrants).

lib dems:

uk-electoral-map-2015-libdem 02

the orkney islanders, again. and quite a lot of support from the scottish highlanders! that was a surprise to me. and the northern lowlanders. is this some viking trend? and where is that in cumbria? westmorland and lonsdale? i dunno anything about that area of the country, except i hear they got a lot of lakes.

snp:

uk-electoral-map-2015-snp

quite a lot of support across the board in scotland. over 40% of the vote almost everywhere (38% in the orkneys & shetland). lower support in some of the border regions toward northumbria.

green party:

uk-electoral-map-2015-green party

generally low support everywhere, but fairly evenly spread (low) support. the people of dál riata aren’t interested, though. (~_^) more support in the south of england? maybe?

plaid cymru:

plaid cymru

again, more support for the welsh national party in the west where people are more welsh — except for in pembrokeshire where they’re not so welsh.

any other patterns?

previously: free cornwall now! and random notes: 07/30/13

(note: comments do not require an email. dunno how the monster raving loony party did….)

free cornwall now!

the long-awaited genetic ancestry mapping of the u.k. by the wellcome trust has finally been completed (hurrah!) — it’s very, very cool! — and it confirms what everyone has always known: the cornish are different! (~_^)

from nature news: UK mapped out by genetic ancestry“A map of the United Kingdom shows how individuals cluster based on their genetics, with a striking relationship to the geography of the country”:

u.k. genetic ancestry mapping

as you can see, all the calls for cornish independence have been justified! the good folks of cornwall are their own little genetic subpopulation, even distinct from their neighbors in devon (as they’ve known all along). so there! =P

to sum up the major findings:

– the welsh appear to be genetically quite different from the rest of the subpopulations in britain, and so the authors reckon they are the most like the earliest hunter-gatherers who migrated to britain at the end of the last ice age.

– the analyses suggest that there was a substantial migration across the channel after the original post-ice-age settlers but before roman times. white british people today have thirty percent (30%) of their dna ancestry from germanic populations, and people in southern and central england share 40% of their dna with the french (again, this relatedness is pre-norman). there’s also substantial relatedness to danes and belgians due to these early migrations. these migrations had little impact in wales.

– there wasn’t a single “celtic” genetic group in britain before the later invasions of the anglo-saxons, etc. the scots, northern irish, welsh, and cornish are some of the most different from each other genetically. the cornish (free cornwall!) are more similar genetically to other english groups than they are to the welsh, for instance.

– the english in eastern, central, and southern england (all those red squares) are pretty much one, relatively homogeneous, genetic group having significant genetic contributions — between 10-40% of their total ancestry — from the anglo-saxons. this strongly indicates that the invading anglo-saxons intermarried with the existing populations and did not replace them 100%.

– fantastically, the danish vikings (of the danelaw of the ninth century) do NOT appear to have left much dna behind at all. their numbers must’ve been small and/or most of them left (or were killed) at some point.

– the cornish (free cornwall!) and devonians are distinct genetic subgroups, and the division between the two groups lies pretty much at the boundaries between the two counties.

– the subpopulation of west yorkshire look like they’re the descendants of the people of elmet (the last of the brittonic kingdoms to hold out against the anglo-saxons)!

– the cumbrians and the northumbrians are distinct from each other, the people of west yorkshire, and the rest of the english.

– yes, the english-speaking population of pembrokeshire is genetically distinct from the rest of the welsh.

– the orkney islanders are the most genetically distinct of all the subgroups having 25% norwegian dna. again, though, the viking invaders mated with the locals and didn’t replace them 100%.

dál riata is apparent on the map there, as are the lowland scots and border reievers contributions to the ulster scots population.

from the telegraph:

“Geneticist Professor Sir Walter Bodmer of Oxford University said: ‘What it shows is the extraordinary stability of the British population. Britain hasn’t changed much since 600AD.

“‘When we plotted the genetics on a map we got this fantastic parallel between areas and genetic similarity.

“‘It was an extraordinary result, one which was much more than I expected. We see areas like Devon and Cornwall where the difference lies directly on the boundary.’

“Professor Mark Robinson, of Oxford University’s department of archaeology added: ‘The genetic make-up we see is really one of perhaps 1400 years ago.'”
_____

for the purposes of this blog, one of the most interesting things is that lack of a danish viking genetic legacy in england. one of the things we’ve been puzzling about here is where on earth the puritans came from, and one of the ideas that has been bandied about has been that perhaps they were the descendants of the danes, since the danish vikings controlled east anglia and that’s where the purtians were from. that idea doesn’t seem to hold water anymore.

(there’s something else in the paper that may or may not, kinda-sorta be of interest regarding the general topic of this blog, but i’m going to address that in a separate post.)

speaking of the puritans and albion’s seed (and american nations), jayman’s already tweeted this!:

(^_^) so there you go.
_____

i think that’s everything for now. there’s a LOT to take in from this research. i look forward to what razib and greg cochran will have to say on the paper.

for now, for more info, have a look at these!:

UK mapped out by genetic ancestry: “Finest-scale DNA survey of any country reveals historical migrations.”
– the original research article (behind a stupid paywall): The fine-scale genetic structure of the British population. the supplementary information file [pdf] looks like it’s a good read.
Britons still live in Anglo-Saxon tribal kingdoms, Oxford University finds: “A new genetic map of Britain shows that there has been little movement between areas of Britain which were former tribal kingoms in Anglo-Saxon England.”
Genetic study reveals 30% of white British DNA has German ancestry: “Analysis over 20 years reveals heavy Anglo-Saxon influence, with French and Danish DNA coming from earlier migrations than the Normans or Vikings.”
Study Reveals Genetic Path of Modern Britons: “Researchers found 17 clusters, based on genetic relatedness, in the modern British population.”
Scientists discover genetic “border” between Devon and Cornwall
– from dienekes: British origins (Leslie et al. 2015)

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