linkfest – 01/18/15

Ancient Jomon people not like present-day East Asians“‘We found a unique genetic position of the Jomon people who had diverged before the diversification of most of present-day East Eurasian populations including East Eurasian Islanders. This indicates that Jomon people were a basal population in East Eurasia and genetically isolated from other East Eurasians for long time.'” – h/t charles!

Uncovering the Genetic History of the Present-Day Greenlandic Population“[W]e analyzed ∼200,000 SNPs from more than 10% of the adult Greenlandic population (n = 4,674). We found that recent gene flow from Europe has had a substantial impact on the population: more than 80% of the Greenlanders have some European ancestry (on average ∼25% of their genome). However, we also found that the amount of recent European gene flow varies across Greenland and is far smaller in the more historically isolated areas in the north and east and in the small villages in the south. Furthermore, we found that there is substantial population structure in the Inuit genetic component of the Greenlanders and that individuals from the east, west, and north can be distinguished from each other. Moreover, the genetic differences in the Inuit ancestry are consistent with a single colonization wave of the island from north to west to south to east. Although it has been speculated that there has been historical admixture between the Norse Vikings who lived in Greenland for a limited period ∼600–1,000 years ago and the Inuit, we found no evidence supporting this hypothesis. Similarly, we found no evidence supporting a previously hypothesized admixture event between the Inuit in East Greenland and the Dorset people, who lived in Greenland before the Inuit.” – h/t razib!

Y chromosome super-fathers“Most of these lineages are so young that there are good chances that their founders were figures from history or mythology.” – from dienekes.

Bone Tool Discovered at Neanderthal Site in France“A bone tool from the Grotte du Bison at Arcy-sur-Cure in France is further evidence that Neanderthals had abilities usually attributed solely to modern humans….”

Early age of alcohol initiation is not the cause of alcohol use disorders in adulthood, but is a major indicator of genetic risk. A population-based twin study.“The association between early age of alcohol initiation and alcohol use disorders in later life does not reflect a causal relationship, but is due almost entirely to common genetic risk factors.”

α-Actinin-3: Why Gene Loss Is an Evolutionary Gain – h/t billare! who tweeted: “Positive selection for broken proteins: Derived ACTN3 mutation seems to help fast-twitch muscles fatigue less slowly.”

Do viruses make us smarter?“[R]etroviruses seem to play a central role in the basic functions of the brain, more specifically in the regulation of which genes are to be expressed, and when.”

Estimating the genotypic intelligence of populations and assessing the impact of socioeconomic factors and migrations – from davide piffer who tweeted: “New version of my paper with genetic distances. Migrations or drift less likely to explain results.” also, from the paper: “The results also provide preliminary evidence in favor of the hypothesis that poor environmental conditions (i.e. economic and sociocultural) tend to depress national IQ scores. Countries with lower per capita GDP and a lower index of Human Development tended to have larger positive ‘residuals’, that is the difference between the score predicted by the regression (of IQs for developed countries on the 4 SNPs g factor) and the actually measured IQ was larger in countries with lower GDP and HDI (r around 0.7). Thus, poorer and less developed countries have yet to reach their full intellectual potential. The results of this study indicate that the gaps in intellectual performance between some populations can be narrowed via adequate improvement of environmental conditions, however the overall pattern of intellectual scores is due to relatively stable and fixed (genetic) factors and cannot be substantially altered.” – see also terrific post from anatoly karlin on this paper!: Genetics, IQ, and Convergence.

Evidence of polygenic selection on human stature inferred from spatial distribution of allele frequencies – also from davide piffer.

Geographical Variation in Dementia: Examining the Role of Environmental Factors in Sweden and Scotland“We found a 2- to 3-fold geographical variation in dementia odds in Sweden, after twin random effects — likely to capture genetic and shared environmental variance — were removed. In Scotland, we found no variation in dementia odds in childhood but substantial variation, following a broadly similar pattern to Sweden, by adulthood. Conclusion: There is geographical variation in dementia rates.” – h/t erwin schmidt! – also Genetics and Underlying Pathology of Dementia.

Archaeogenomic insights into the adaptation of plants to the human environment: pushing plant–hominin co-evolution back to the Pliocene“The colonization of the human environment by plants, and the consequent evolution of domesticated forms is increasingly being viewed as a co-evolutionary plant–human process that occurred over a long time period, with evidence for the co-evolutionary relationship between plants and humans reaching ever deeper into the hominin past. This developing view is characterized by a change in emphasis on the drivers of evolution in the case of plants. Rather than individual species being passive recipients of artificial selection pressures and ultimately becoming domesticates, entire plant communities adapted to the human environment.” – h/t george perry!

Son of Edar“[S]omebody should look for characteristic racial differences in tears, sebaceous glands, Meobomian glands, and salivary glands. And possibly fingernails. They may well exist, be driven by this EDAR mutation, and some might play a role in its selective advantage.” – from greg cochran.

Quality vs Quantity“To the extent that human capital is a product of genetic factors (quite a lot), this tradeoff *does not exist*.” – also from greg cochran.

Lower mortality rates among Asian, Hispanic lupus patients“Asian and Hispanic patients with systemic lupus erythematosus (SLE) have lower mortality rates compared to Black, White, or Native Americans with the disease, scientists have found. Findings indicate that the risk for death among White patients is much lower than in Black and Native American SLE patients.”

Genetic errors linked to more ALS cases than scientists had thought – h/t jayman!

Is your face special?“Face recognition is highly heritable and weakly related to *g* so it probably has its own module, or a favoured set of circuits which only partly taps into the central processor power of general intelligence. So, not only is your face is special. but your specialised ability to recognise faces is even more special.” – from dr. james thompson.

Are flu shots effective? Your genetics determine how the immune system responds

Environment, more than genetics, shapes immune system“Everyone’s immune system is slightly different—a unique mixture of hundreds of these cells and proteins. But the main driver of this variation is unclear. Although scientists know that our immune system can adapt to our environment—that’s why vaccines work, for instance—it is also built by our genes…. After recruiting 210 identical and fraternal twins between 8 and 82 years old, Davis and colleagues took blood samples and measured more than 200 parameters of their immune systems. For example, they measured the numbers of 95 kinds of immune cells and 51 kinds of proteins. Today, the researchers report online in Cell that identical twins’ immune systems were too different for the variation to boil down to genetics. Indeed, environment overshadowed inheritance in three-quarters of the measurements, and half showed no measurable genetic influence. Moreover, younger twins were more similar than were older twins, evidence that as the twins aged and were exposed to different environments, their immune systems diverged over time.”

Levels of Selection Are Artefacts of Different Fitness Temporal Measures“I show by comparing the fitness of individuals with that of collectives of individuals in the same environment and over the same period of time – as required to decide if one or more levels of selection is acting in a population – that the selection of collectives is a by-product of selection at the individual level; thus, talking about two or more levels of selection represents merely a different perspective on one and the same process.”

Does incidental disgust amplify moral judgment? A meta-analytic review of experimental evidence [pdf] – “We meta-analyzed all available studies, published and unpublished, that experimentally manipulated incidental disgust prior to or concurrent with a moral judgment task (k=50). We found that there is evidence for a small amplification effect of disgust (d=.11), which is strongest for gustatory/olfactory modes of disgust induction. However, there is also some suggestion of publication bias in this literature, and when this is accounted for, the effect disappears entirely (d=-.01). Moreover, prevalent confounds mean that the effect size that we estimate is best interpreted as an upper bound on the size of the amplification effect. The results of this meta-analysis argue against strong claims about the causal role of affect in moral judgment and suggest a need for new, more rigorous research on this topic.” – h/t stuart ritchie!

The DNA photofit: Amazing breakthrough means police can tell suspect’s colour, height and even age – from a tiny speck of blood – daily mail.

The Coming Stability? The Decline of Warfare in Africa and Implications for International Security“The years 2010–2013 saw an increase of 35 per cent in African battle deaths over 2005–2010, but they still are 87 per cent lower than the 1990–1999 average…. Consequently, there is no Africa exception to the systemic shift towards lower levels of armed conflict.” – h/t mugwump!

The Scariest Explanation for America’s Vast Prison Population: We Want It That Way“[I]n federal prisons at least, Hispanics have overtaken blacks in the dubious distinction of being the most disproportionately imprisoned. Nor can we blame the war on drugs. The idea that vast numbers of Americans are in prison for smoking pot or snorting blow turns out to be a fantasy. About 20 percent of inmates are in for drug-related crimes, but those crimes are rarely limited to their own casual use. According to a 2004 estimate, only about 12,000 people were incarcerated for simple possession, without intent to traffic or distribute.”

Sorry, liberals, Scandinavian countries aren’t utopias“Finland, which tops the charts in many surveys (they’re the least corrupt people on Earth, its per-capita income is the highest in Western Europe and Helsinki often tops polls of the best cities), is also a leader in categories like alcoholism, murder (highest rate in Western Europe), suicide and antidepressant usage….” – [huh. even with all that tango dancing!] – “It turns out that the ‘warrior gene’ — actually the enzyme monoamine oxidase A, which is linked to impulsive behavior, violence and alcoholism — is especially prevalent in Finland. ‘Dark’ doesn’t just describe winter in the Arctic suburbs, it applies to the Finnish character.” – h/t ninja economics!

The relationship between anti-gay prejudice and the categorization of sexual orientation“[I]ndividuals reporting higher levels of anti-gay bias appear to be less accurate judges of sexual orientation.” but “Italians reporting greater anti-gay bias miscategorized fewer gay faces as straight.” – h/t ben southwood!

Legal Recognition of Same-Sex Couples and Family Formation“It has long been debated how legalizing same-sex marriage would affect (different-sex) family formation. In this article, I use data on OECD member countries for the period 1980–2009 to examine the effects of the legal recognition of same-sex couples (through marriage or an alternative institution) on different-sex marriage, divorce, and extramarital births. Estimates from difference-in-difference models indicate that the introduction of same-sex marriage or of alternative institutions has no negative effects on family formation…. In addition, the country-by-country case studies provide evidence of homogeneity of the estimated effects.”

Pair-Bonding, Romantic Love, and Evolution – The Curious Case of Homo sapiens“We conclude there is interdisciplinary support for the claim that romantic love and pair-bonding, along with alloparenting, played critical roles in the evolution of Homo sapiens.”

Sex ratio effects on reproductive strategies in humans – among the makushi people of guyana.

Antiquity of dairy farming in Ireland revealed“Research published today in the Journal of Environmental Archaeology shows that dairying on the island goes back approximately 6,000 years, revealed through traces of ancient dairy fats found in pots dating to around 4,000 to 2,500 BC.” – h/t frau katze!

The origin and evolution of maize in the American Southwest

A Breeder Apart: Farmers Say Goodbye to the Bull Who Sired 500,000 Offspring“Fans Commemorate ‘Toystory,’ a Dairy Legend With a Ravenous Libido” – the genghis khan of bulls! h/t mr. robert ford!

Items lost in the Stone Age are found in melting glaciers“Mittens, shoes, weapons, walking sticks – lost in the high mountains of Norway thousands of years ago – are now emerging from melting ice.”

bonus: ‘I can haz genomes’: cats claw their way into genetics“Canine dominance bows to tabby chic as cat sequencing takes off.”

bonus bonus: Some Microbes Can Eat And Breathe Electricity – whoa.

bonus bonus bonus: Britain’s oldest person Ethel Lang dies aged 114“Ethel Lang was believed to be the last person living in the UK who was born in the reign of Queen Victoria.” – h/t ed west!

bonus bonus bonus bonus: Two New Studies Posit At Least Two New Planets Out Beyond Pluto

bonus bonus bonus bonus bonus: Whaleworld: Looking for cetacean culture – h/t steve stewart williams! who tweeted: “Millions of years before human culture appeared, there was culture in the ocean.” – cool!

bonus bonus bonus bonus bonus bonus: Medieval Apps.

bonus bonus bonus bonus bonus bonus bonus: Archaeologists find 132-year-old Winchester rifle leaning against Nevada desert tree

bonus bonus bonus bonus bonus bonus bonus bonus: Irn Bru release 57 Scottish tartan labels and clan finder website promotion (~_^)

bonus bonus bonus bonus bonus bonus bonus bonus bonus: “At some German crossings you can play a game of Pong with the person standing at the other side.” (^_^)

bonus bonus bonus bonus bonus bonus bonus bonus bonus bonus: If birds in a truck fly, does the truck get lighter? – hey…don’t bogart that joint, new scientist!

bonus bonus bonus bonus bonus bonus bonus bonus bonus bonus bonus: Kareem Abdul-Jabbar to Publish a Novel About Sherlock Holmes’s Brother Mycroft – danced a few dances with kareem! (^_^) (not a euphemism. for anything!)

(note: comments do not require an email. i can haz genomz?)

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linkfest – 12/01/14

look! another linkfest! (^_^)

Our Cats, Ourselves“Which brings us to the genome of one critical tame animal: ourselves, humans. The Nobel Prize-winning zoologist Konrad Z. Lorenz once suggested that humans were subject to the same dynamics of domestication. Our brain and body sizes peaked during the end of the last ice age, and declined with the spread of agriculture…. Our cultural flexibility and creativity since the end of the ice age have not freed humans from evolutionary forces, but have opened up novel and startling paths. Thinking of domestication as an evolutionary process that occurs through ‘artificial’ selection creates a false dichotomy of nurture and nature that plays into a conceit of human exceptionalism. In fact, the idea that we are apart from nature, that it is ours to tame and exploit, is an outmoded approach. A more useful interpretation is that over the past 10,000 years, humans fashioned their own ecosystem. We were part of a natural process that altered the landscape…. The same forces that reshaped the genomes of our domesticates also reshaped ours.” – from razib. in the new york times! (^_^)

Ancient Easter Islanders Interbred With Native Americans“According to the recent study conducted by geneticists, the ancient inhabitants of Easter Island met and interbred with Native Americans long before Westerners arrived…. The recent genetic study is published on Thursday in the Current Biology journal. According to the study, these ancient people had significant contact with Native Americans hundreds of years ago, before the westerners reached the Island in 1722…. The finding of the study suggests that the intermixing occurred 19 to 23 generations ago. The researchers said that the Polynesian people (Rapa Nui’s) are not believed to have started mixing with Europeans until much later, the 19th century. Malaspinas said the genetic ancestry of today’s Rapa Nui people is roughly 75% Polynesian, 15% European and 10% Native American.”

Barley fuelled farmers’ spread onto Tibetan plateau“Cold-tolerant crop enabled high-altitude agriculture some 3,600 years ago”

Faster than Fisher“[M]igration and conquest, must explain the wide distribution of many geographically widespread selective sweeps and partial sweeps. They were adaptive, all right, but expanded much faster than possible from purely local diffusion.” – from greg cochran.

The Germ of Laziness – also from greg cochran.

Putting IBD to Bed – from razib.

The Red Queen Model of Recombination Hotspots Evolution in the Light of Archaic and Modern Human Genomes – h/t mwpennell! who tweeted: “Recombination hotspots in humans appear to be young…evidence for Red Queen theory for evolution of recombination?”

Inclusive fitness and sexual conflict: How population structure can modulate the battle of the sexes – h/t rebecca sear!

Do Chinese people get bored less easily?“Advanced farming — intensive land use, task specialization, monoculture — has profoundly shaped East Asian societies, particularly China. This is particularly so for rice farming. Because the paddies need standing water, rice farmers must work collectively to build, dredge, and drain elaborate irrigation networks. Wheat farming, by comparison, requires no irrigation and only half as much work. Advanced farming seems to have favored a special package of predispositions and inclinations, including greater acceptance of monotony. This has been shown in two recent studies.” – from peter frost.

Culture and state boredom: A comparison between European Canadians and Chinese“European Canadians (vs. Chinese) are more likely to experience state boredom.” – h/t erwin schmidt!

Gender differences in preferences, choices, and outcomes: SMPY longitudinal study“The figures show significant gender differences in life and career preferences, which affect choices and outcomes *even after ability is controlled for*…. According to the results, SMPY men are more concerned with money, prestige, success, creating or inventing something with impact, etc. SMPY women prefer time and work flexibility, want to give back to the community, and are less comfortable advocating unpopular ideas. Some of these asymmetries are at the 0.5 SD level or greater.” – from steve hsu.

Are liberals and conservatives differently wired? – also from peter frost.

Detecting ‘polygenes’ using signals of polygenic selection. Tools for increasing the power of GWAS – from davide piffer who tweeted: “Watson and Venter’s genomes have higher frequency of intelligence polygenenes.”

Intelligence lost at 1.23 IQ points per decade“Michael Woodley of Menie spends much of his time tending his ancestral estate, pacing the linen-fold panelled rooms of the ancient house, warming his hands at the towering stone fireplace and meditating on the collapse of the aristocracy, the paucity of contemporary innovation and the lamentable and persistent downward drift of the national intellect. Now he sends me a barefoot runner with his latest manuscript, which I have read as the autumn mists creep across the Nadder valley, before penning this reply for the poor urchin to carry back to his master. Young Woodley avers that, not only are we going to hell in a handcart, but we are doing so at a pace which he can predict with some accuracy (1.23 IQ points per decade), composed as it is of two dysgenic effects: the dull have been reproducing with greater fecundity than the bright (.39), and increasing paternal age has increased the rate of deleterious mutations (.84).” – from dr. james thompson.

Gypsy intelligence – also from dr. james thompson.

Lower Body Symmetry and Running Performance in Elite Jamaican Track and Field Athletes – h/t keith laws! who tweeted: “More symmetrical knees & ankles in Elite Jamaican track and field athletes…Of course…”

Great Ape Origins of Personality Maturation and Sex Differences: A Study of Orangutans and Chimpanzees

The Case Against Early Cancer Detection“[C]ancer screening may harm more people than it helps.” – h/t jason collins!

In the U.S., Few Heavy Drinkers Are Actually Alcoholics“About 90 percent of people who drink excessively — more than eight drinks a week for women, 15 for men — are not alcohol dependent.” – h/t ray sawhill!

Genes tell new story: Alcohol in moderation only benefits 15% of population“An alcoholic beverage a day, especially wine, is widely believed to help keep heart disease risk low, but new research from the University of Gothenburg shows that only about 15% of the human population — those with a specific the form of the cholesteryl ester transfer protein (CETP) gene — actually gain this benefit from moderate alcohol consumption.”

The Real Roots of Midlife Crisis“What a growing body of research reveals about the biology of human happiness — and how to navigate the (temporary) slump in middle age.”

Despite its problems, the United States of America is still the best. Thing. Ever.“Other aspects of America’s story, though, seem less important now that the quest for racial equality has become almost a religious mission; this week I finally got around to watching the HBO series John Adams, which begins with the Massachusetts lawyer defending Captain Thomas Preston, the officer blamed for the Boston massacre. The mob wanted to avenge the deaths but, this being a colony where people passionately believed in their ancestral English liberties, ‘due process’ was followed – a term that dates back to the Parliament of Edward III but was obviously influenced by Clause 39 of the Magna Carta. Due process is what was followed in the Ferguson case, but maybe that’s just a boring old racist Anglo-Saxon idea that we can forget about now (grand juries are literally Anglo-Saxon, dating back to the reign of Ethelred II, or possibly the vibrant culturally-enriching Viking maniac King Canute).” – from ed west.

Children are not science projects“What do we tell to prospective adoptive parents? The first answer, and the only answer that ultimately counts, is that they are doing the Lord’s work. They have the opportunity to provide love and nurturing to a child who needs it. There are few better things that human beings can do with their time. The second answer is that they, like biological parents, are not miracle-workers. They will be unable to mold the child. Sometimes their adopted child will experience problems that are not the adoptive parents’ fault; sometimes they will reveal gifts of talent and character that are equally not to the adoptive parents’ credit. What is to the credit of good parents, adoptive and biological alike, is enfolding the child in love.” – from charles murray…who’s really just a big softie after all. (^_^) — see also: Adopt a child, but discard an illusion from dr. james thompson.

In Northern Ireland, a Wave of Immigrants Is Met With Fists – which came (or *should’ve* come) as a surprise to absolutely no one….

When exactly did the Industrial Revolution start?

Europe’s Bronze Age Collapse Not Caused by Climate Change

How Thanksgiving, the ‘Yankee Abolitionist Holiday,’ Won Over the South

Your Inner Feather“About 300 million years ago, our ancestors began to lay hard-shelled eggs. Those early animals would give rise to mammals, reptiles, and birds (collectively known as amniotes, named for the amniotic egg). Edwards and his colleagues found that the first amniotes already had the *entire* complement of feather patterning genes. That means you, as an amniote, have them too.” – cool!

Viruses as a Cure

Stop eating cats and dogs say animal rights campaigners in Switzerland“Cat appears on traditional Christmas menus in some areas of Switzerland.” – wait. what?!

bonus: Snakes are ‘righties’ — with their penis, that is

bonus bonus: Snakes Leave Identity Within Their Fang Marks“Getting a DNA swab from the fang marks of a snake bite can accurately identify the type of snake, a team working in Nepal has found.”

bonus bonus bonus: Monterey Bay researchers capture rare deep-sea anglerfish on video for first time – whoa!

bonus bonus bonus bonus: Ants Regularly Pack Up and Dig New Nests, and Nobody Knows Why

bonus bonus bonus bonus bonus: Red Baron’s WWI German Fokker triplane rebuilt by flying enthusiast – oooo! pretty. (^_^)

(note: comments do not require an email. a face only a mother could love. maybe.)

linkfest – 09/23/12

New genetic light shed on human evolution“A new genetic study of a group of sub-Saharan peoples has challenged the prevailing view that modern humans emerged from one location in Africa before spreading out across the world.” – see also Complex origins and natural selection of the Khoe-San from dienekes. and also African neighbours divided by their genes.

Out-of-Asia and Into-Africa (?)“[I]t is very likely that there was indeed such a migration into East Africa. What Pickrell et al. have added to our knowledge is that this migration is fairly recent.” – from dienekes.

Are We Really Getting Smarter? – from james flynn.

Neanderthals used feathers as ‘personal ornaments’

Are Neanderthals Human?

Genetic Obesity Risk Heightened by Sugary Drinks“[P]ersons with a greater genetic predisposition to obesity appeared to be more susceptible to the deleterious effects of sugar-sweetened beverages on BMI….”

speaking of fat: Human biodiversity in adiposity“[T]he manner in which fat is deposited in the body, e.g. viscerally vs. subcutaneously, as well as the amount of fat deposited, is substantially heritable, varies between races, and that variation may be due to differences in infectious disease risk over time periods long enough for natural selection to act.” – @the breviary.

Not Wanting Kids Is Entirely Normal – but won’t be selected for….

Why We Need to Study the Brain’s Evolution in Order to Understand the Modern Mind

Prehistoric Animated Cave Drawings Discovered In France – cool!

How to confuse a moral compass“Survey ‘magic trick’ causes attitude reversal.” – people are really retarded. (no offense to retarded people.)

Contestants Race to Map DNA of 100 Centenarians

The 10 best-educated countries in the world

bonus: Warp Drives Might Be More Realistic Than Thought – zooooooooom!

bonus bonus: Bird brains? Crows remember your face (and know you’re hiding in there)

bonus bonus bonus: Ohio woman who unknowingly married her father says learning the secret was ‘devastating’ – oops! (they didn’t have any kids.)

bonus bonus bonus bonus: How the Tabby Got Its Stripes: It’s in the Genes“Tabby cats get their stripes from two important genes, according to new research — the same genes that create a rare ‘king’ cheetah’s stripes. Cats with narrow stripes, the so-called ‘mackerel’ pattern, have a working copy of the gene. But if a mutation turns the gene off, the cat ends up with the blotchy ‘classic’ pattern.”

(note: comments do not require an email. mackerel tabby.)

linkfest – 03/06/11

Happy children make happy adults“New research links well-being in adolescence with life satisfaction in adulthood”

Binge-drinking is in the genes: Scientists isolate brain chemical that makes us crave alcohol – TLR4 gene

Skull in Underwater Cave May Be Earliest Trace of First Americans

Is Romantic Love a Western, Heterosexual Construct? from the neurocritic.

Science explains why humor turns women on

Men who glare angrily when someone spills their pint are ‘reverting to their caveman instinct’

Ape or Human? Fossils’ Link to Evolution Questioned“In a paper published Feb. 19 in the science journal Nature, two paleoanthro-pologists argue that some recently discovered primate fossils may not be as human as everyone thinks.” see also Ancestor Worship

Listening to music is biological

Factors influencing the temporal patterns of dyadic behaviours and interactions between domestic cats and their owners or The Science of Women and Cats: The Bond Is Real